aBiotech Laboratory, Standard Diagnostics Inc., Yongin, Korea
bDepartment of Life Science, College of Natural Science, Kyonggi University, Suwon, Korea
cDepartment of Laboratory Medicine, College of Medicine, Soonchunhyang University, Cheonan, Korea
dDivision of Influenza Virus, Korea National Institute of Health, Osong, Korea
© 2013 Published by Elsevier B.V. on behalf of Korea Centers for Disease Control and Prevention.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Dilution (HAU) | Hemagglutination assay | pdm09-ICA |
---|---|---|
1:2 (21) | + | +++ |
1:4 (22) | + | ++ |
1:8 (23) | + | ++ |
1:16 (24) | + | + |
1:32 (25) | – | + |
1:64 (26) | – | +w |
1:128 (27) | – | ± |
1:256 (28) | – | ± |
1:512 (29) | – | – |
Real-time PCR resultsa (nb) |
No. of specimens with pdm09-ICA |
% Clinical sensitivity (95% CI) | % Clinical specificity (95% CI) | PPV (%) | NPV (%) | |
---|---|---|---|---|---|---|
Positive | Negative | |||||
Confirmed positive (145) | 110 | 35 | 75.86 (68.29–82.1) | — | 100 | — |
Confirmed negative (43) | 0 | 43 | — | 100 (91.8–100) | — | 55.1 |
Dilution (HAU) | Hemagglutination assay | pdm09-ICA |
---|---|---|
1:2 (21) | + | +++ |
1:4 (22) | + | ++ |
1:8 (23) | + | ++ |
1:16 (24) | + | + |
1:32 (25) | – | + |
1:64 (26) | – | +w |
1:128 (27) | – | ± |
1:256 (28) | – | ± |
1:512 (29) | – | – |
Type | Strain | HAU | Pdm09-ICA results |
---|---|---|---|
H1N1 | A/PR/8/34 | 27 | – |
A/Brisbane/59/2007 | 27 | – | |
A/Solomon Islands/3/2006 | 28 | – | |
A/New Caledonia/20/99 | 27 | – | |
A/Swine/Korea/GC0503/2005 | 26 | ± | |
H2N2 | A/Singapore/1/57 | 27 | – |
H3N2 | A/Hong Kong/8/68 | 26 | – |
H3N5 | A/Swine/Korea/GC0407/2005 | 27 | – |
H3N8 | A/Duck/Ukraine/1/63 | 25 | – |
H4N6 | A/Duck/Czechoslovakia/56 | 27 | – |
H5N3 | A/Duck/Hong Kong/820/80 | 26 | – |
H6N5 | A/Shearwater/Australia/1/72 | 27 | – |
H7N1 | A/Duck/Hong Kong/301/78 | 24 | – |
H8N4 | A/Turkey/Ontario/6118/68 | 26 | – |
H9N2 | A/Turkey/Wisconsin/1/66 | 28 | – |
H10N7 | A/Chicken/Germany/N/49 | 27 | – |
H10N9 | A/Duck/Hong Kong/562/1979 | 28 | – |
H11N6 | A/Duck/England/56 | 28 | – |
H11N8 | A/Duck/Hong Kong/T37/97 | 27 | – |
B | B/Lee/40 | 25 | – |
Real-time PCR results | No. of specimens with pdm09-ICA | % Clinical sensitivity (95% CI) | % Clinical specificity (95% CI) | PPV (%) | NPV (%) | |
---|---|---|---|---|---|---|
Positive | Negative | |||||
Confirmed positive (145) | 110 | 35 | 75.86 (68.29–82.1) | — | 100 | — |
Confirmed negative (43) | 0 | 43 | — | 100 (91.8–100) | — | 55.1 |
Real-time PCR | No. of specimens with pdm09-ICA | Sensitivity(%) | ||
---|---|---|---|---|
CP interval | No. of positive | Positive | Negative | |
<20 | 22 | 21 | 1 | 95.45 |
20–25 | 69 | 61 | 8 | 88.4 |
25–30 | 34 | 23 | 11 | 67.65 |
>30 | 20 | 5 | 15 | 25 |
Total | 145 | 110 | 35 | 75.86 |
+ = positive; ++ = medium positive; +++ = strong positive; +w = weak positive; ± = trace; – = negative; HAU = hemagglutinating units; ICA = immunochromatographic assay.
HAU = hemagglutinating units; ICA = immunochromatographic assay.
CI = confidence interval; ICA = immunochromatographic assay; NPV = negative predictive value; PPV = positive predictive value; RT-PCR = reverse-transcription polymerase chain reaction. As determined by Roche real-time PCR.
CP = crossing point; ICA = immunochromatographic assay; RT-PCR = reverse-transcription polymerase chain reaction.